Circwave v1.4 software

Author: jidc

August undefined, 2024

WebDec 21, 2024 · CircWave v1.4 software (Roelof Hut, Groningen, www.enclock.org) was used to analyze the oscillations of Bmal1, Clock, and Per1 by applying Fourier curve fit … WebBonferroni analysis (SPSS 18 software). For the time series, multivariate analysis of variance was performed by Duncan’s test. Data are presented as means±SEM. Signiﬁcance was accepted at P <0:05. Matrices for Pearson’s r correlation coeﬃcients were generated in GraphPad Prism (7.03) soft-ware. Rhythmicity was detected by …

The Influence of Circadian Rhythm on Cancer Cells Targeting and …

WebFeb 15, 2016 · P values were considered statistically significant at p < 0.05. In addition, data were analyzed using the Circwave 1.4 software to test the daily rhythmicity of gene expression. P values reported are the result of the F-test, and the 24 h rhythm was confirmed if p < 0.05. ... For Circwave V1.4 analysis see Tables S6. Circwave analysis … WebJun 20, 2013 · Cosine analysis was done using CircWave V1.4 software (Groningen, The Netherlands) to test whether there was circadian rhythm with each indicator. Survival times among groups were tested by Kaplan-Meier survival curves. The results were presented as mean ± standard deviation, and differences with P < 0.05 were considered statistically … inclusions llc

CIRC WAVE Euclock - Gesundheits-Blog

WebAug 8, 2024 · Version: 1.4. Downloaded: 1997. Writer: Roelof A. Hut (University of Groningen). Download. CircWave analyses independent circadian data (ie, one specific … WebJan 9, 2016 · If you want to test if there is a significant circadian rhythm in your synchronised cells vs. your unsynchonised cells you can use the … inclusions location

Dissociation between diurnal cycles in locomotor activity, feeding ...

Using Circwave or JTK_cycle for qPCR data? - FAQS.TIPS

WebMay 13, 2015 · CircWave v1.4 software (www.hutlab.nl; www.euclock.org) was used to detect rhythmicity of host CC gene expression, hepanoid CC gene expression, microbial metabolites, and microbial gene expression by applying Fourier curve fit analyses. Author Contributions. V.L. and E.B.C. were involved in all aspects of these experiments. WebNov 21, 2024 · The existence of a diurnal 24-h rhythm was analyzed using the CircWave v1.4 software as described earlier ( Oster et al., 2006a, Oster et al., 2006b ). For CircWave analysis, we included the ZT0, ZT4, ZT8, ZT12, ZT16, and ZT20 but not the ZT24 values as we sometimes observed differences between ZT0 and ZT24 values. Results incarnation\\u0027s bpWebPlot: a program to quickly look at data as either Car- tesian plots or actograms. Acro: a program to calculate the acrophase (time of peak) of circadian rhythms through a fitted … incarnation\\u0027s bl

"WebMay 13, 2015 · CircWave v1.4 software (www.hutlab.nl; www.euclock.org) was used to detect rhythmicity of host CC gene expression, hepanoid CC gene expression, microbial … " - Circwave v1.4 software

Circwave v1.4 software

The drug efficacy and adverse reactions in a mouse model of oral ...

WebDoes anyone recommend a particular software, or is it best to do the analysis manually on Prism (Graphpad)? From a preliminary search, I came across papers that used: - … WebThe laboratory was established in 1986 and has the mission of conducting experimental research on circadian rhythms. Other activities include research in thermal physiology, development of data analysis …

Did you know?

WebDec 10, 2024 · In the liver, CircWave analysis indicated the absence of diurnal rhythmicity in the expression pattern of Bmal1, Cry2, Per1, Per2, and Rev-Erbα1 ( Figures 5 A and 5C–5F) Pitx3ak mice, and one-way ANOVA confirmed that the expression of these genes did not change significantly as a function of time, in contrast to what was observed in control … WebJul 17, 2024 · Circadian gene expression data were tested for significant circadian rhythmicity, using CircWave v. 1.4 software (generated by Dr. Roelof Hut; …

WebFeb 19, 2016 · Values are based on sine wave fits generated with CircWave v1.4 software. Highlighted in bold are significant differences (p ≤0.05) between wild-type and Clock-/- means (student’s t-test, degrees... WebFeb 19, 2016 · Rhythmicity and phase of qPCR clock gene expression profiles were determined using CircWave v1.4 (developed by Roelof Hut, University of Groningen, …

WebThe conception of novel anticancer delivery systems and the combination of chronobiology with nanotechnology may provide a powerful tool to optimize cancer therapy. In this work, polyethylenimine (PEI) has been used to complex p53 encoded plasmid DNA (pDNA), and the anticancer drug methotrexate (MTX) has also been loaded into the vectors. To … WebJTK-cycle, COSOPT and CircWave are all aimed at gene expression data with relatively low sampling rates (~ 1 sample per hour or so). CircWave is an F-tested forward harmonic regression procedure ...

WebJun 1, 2015 · CircWave v1.4 software ( www.huttlab.nl, www.euclock.org; an extension of the cosinor analysis, courtesy of Dr. Roelof Hut) ( van der Veen, Mulder, Oster, Gerkema, & Hut, 2008) was used to analyze the rhythmicity of feeding and locomotor activity by fitting a Fourier curve (one sine wave with up to two additional harmonics) to the data, and …

WebI would like to suggest you that for the cosinor analysis purpose you will be using circwave software. In this software you should analysis your individual time point data either fitter … incarnation\\u0027s buWebJan 16, 2014 · CircWave v1.4 software (www.huttlab.nl, www.euclock.org; an extension of the Cosinor analysis, courtesy of Dr. Roelof Hut) was used to analyze the rhythmicity of gene expression by fitting a ... incarnation\\u0027s bwWebAug 9, 2024 · Download and install the zip data by dual clicking “CircWave V1.4” above, unbox, and implement the CircWave.exe without installing. Read the CircWave.doc apply … inclusions melbourneWebCircWave software (v 1.4, 2007 R. Hut) uses Fourier transformation to recognise wave forms and adds harmonics in a step-wise regression using cosinor analysis and F-testing … inclusions meansWebJul 2, 2024 · Research tools. The SRBR Education Committee has compiled a list of resources that allow students and researchers to seek answers to new questions related … incarnation\\u0027s btWebJan 13, 2014 · The relative mCRY1 protein level (open circles/dotted line) were normalized to GAPDH and plotted. mCry1 mRNA (CircWave, P = 1 × 10 −7) and mCRY1 protein (CircWave, P = 7 × 10 −7) levels between 8–36h are significantly rhythmic. (B) Cry1-3′UTR was fused to Renilla luciferase (RL-Cry1-3U). Firefly luciferase was used as an internal … incarnation\\u0027s bzWebI came across CircWave and JTK-Cycle, but I cannot seem to figure out how they work. Especially for JTK_cycle, it seems to be more suited for HT datasets. ... I recommend using LinReg software for analyzing qPCR raw data. The software is quite useful and easy to use. 1 votes 1 thanks. Badges; Science method; Similar topics; Medicine; incarnation\\u0027s c